Difference between revisions of "CwlP"

From SubtiWiki
Jump to: navigation, search
Line 32: Line 32:
  
 
<br/><br/>
 
<br/><br/>
 +
 +
= [[Categories]] containing this gene/protein =
 +
{{SubtiWiki category|[[cell wall degradation/ turnover]]}},
 +
{{SubtiWiki category|[[SP-beta prophage]]}}
 +
 +
= This gene is a member of the following [[regulons]] =
 +
  
 
=The gene=
 
=The gene=
Line 51: Line 58:
  
  
= Categories containing this gene/protein =
+
 
{{SubtiWiki category|[[cell wall degradation/ turnover]]}},
 
{{SubtiWiki category|[[SP-beta prophage]]}}
 
 
=The protein=
 
=The protein=
  

Revision as of 14:28, 9 December 2010

  • Description: cell wall hydrolase of the SP-beta prophage region,

Gene name cwlP
Synonyms yomI
Essential no
Product cell wall hydrolase
Function cell wall turnover
MW, pI 252 kDa, 8.268
Gene length, protein length 6855 bp, 2285 aa
Immediate neighbours yomJ, yomH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YomI context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell wall degradation/ turnover, SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21350

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: hydrolyzes the peptidoglycan and cell wall of B. subtilis PubMed
  • Protein family: FPP/GGPP synthetase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: contains soluble lytic transglycosylase (SLT) and peptidase M23 domains PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

I Putu Sudiarta, Tatsuya Fukushima, Junichi Sekiguchi
Bacillus subtilis CwlP of the SP-{beta} prophage has two novel peptidoglycan hydrolase domains, muramidase and cross-linkage digesting DD-endopeptidase.
J Biol Chem: 2010, 285(53);41232-43
[PubMed:20980266] [WorldCat.org] [DOI] (I p)