Difference between revisions of "CsbC"

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(Basic information/ Evolution)
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* '''Protein family:'''
 
* '''Protein family:'''
  
* '''Paralogous protein(s):'''
+
* '''Paralogous protein(s):''' [[AraE]], [[YdjK]], [[YfiG]], [[YncC]], [[YwtG]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 12:48, 20 August 2013

  • Description: general stress protein, similar to pentose transporter

Gene name csbC
Synonyms yxcC
Essential no
Product putative pentose transporter
Function unknown
Gene expression levels in SubtiExpress: csbC
Interactions involving this protein in SubtInteract: CsbC
MW, pI 49 kDa, 9.943
Gene length, protein length 1383 bp, 461 aa
Immediate neighbours yxcD, htpG
Sequences Protein DNA DNA_with_flanks
Genetic context
CsbC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CsbC expression.png















Categories containing this gene/protein

transporters/ other, general stress proteins (controlled by SigB), membrane proteins

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU39810

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
    • contains 12 trans-membrane domains PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Carmine G Monteferrante, Calum MacKichan, Elodie Marchadier, Maria-Victoria Prejean, Rut Carballido-López, Jan Maarten van Dijl
Mapping the twin-arginine protein translocation network of Bacillus subtilis.
Proteomics: 2013, 13(5);800-11
[PubMed:23180473] [WorldCat.org] [DOI] (I p)

Elodie Marchadier, Rut Carballido-López, Sophie Brinster, Céline Fabret, Peggy Mervelet, Philippe Bessières, Marie-Françoise Noirot-Gros, Vincent Fromion, Philippe Noirot
An expanded protein-protein interaction network in Bacillus subtilis reveals a group of hubs: Exploration by an integrative approach.
Proteomics: 2011, 11(15);2981-91
[PubMed:21630458] [WorldCat.org] [DOI] (I p)

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

Samina Akbar, Soon Youl Lee, Sharon A Boylan, Chester W Price
Two genes from Bacillus subtilis under the sole control of the general stress transcription factor sigmaB.
Microbiology (Reading): 1999, 145 ( Pt 5);1069-1078
[PubMed:10376822] [WorldCat.org] [DOI] (P p)