Difference between revisions of "CotR"
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|style="background:#ABCDEF;" align="center"|'''Function''' || hydrolysis of lysophospholipids | |style="background:#ABCDEF;" align="center"|'''Function''' || hydrolysis of lysophospholipids | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34530 cotR] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 10.2 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 10.2 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cotQ]]'', ''[[trnQ-Arg]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cotQ]]'', ''[[trnQ-Arg]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34530 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yvdO_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvdO_context.gif]] | ||
Revision as of 13:55, 13 May 2013
- Description: spore protein, lipolytic enzyme
| Gene name | cotR |
| Synonyms | yvdO |
| Essential | no |
| Product | spore lipolytic enzyme |
| Function | hydrolysis of lysophospholipids |
| Gene expression levels in SubtiExpress: cotR | |
| MW, pI | 35 kDa, 10.2 |
| Gene length, protein length | 960 bp, 320 aa |
| Immediate neighbours | cotQ, trnQ-Arg |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of lipids, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34530
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: release of myristic acid from 1-myristoly-2-lyso-sn-glycero-3-phosphocholine PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- spore wall (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O06996
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Shiro Kato, Tohru Yoshimura, Hisashi Hemmi, Ryuichi Moriyama
Biochemical analysis of a novel lipolytic enzyme YvdO from Bacillus subtilis 168.
Biosci Biotechnol Biochem: 2010, 74(4);701-6
[PubMed:20378985]
[WorldCat.org]
[DOI]
(I p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
S Little, A Driks
Functional analysis of the Bacillus subtilis morphogenetic spore coat protein CotE.
Mol Microbiol: 2001, 42(4);1107-20
[PubMed:11737650]
[WorldCat.org]
[DOI]
(P p)
