Difference between revisions of "CotJA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || polypeptide composition of the spore coat
 
|style="background:#ABCDEF;" align="center"|'''Function''' || polypeptide composition of the spore coat
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU06890 cotJA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU06890 cotJA]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CotJA CotJA]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CotJA CotJA]
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yesF]]'', ''[[cotJB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yesF]]'', ''[[cotJB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12508&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU06890 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU06890 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU06890 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:cotJA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cotJA_context.gif]]

Revision as of 12:19, 13 May 2013

  • Description: polypeptide composition of the spore coat

Gene name cotJA
Synonyms
Essential no
Product unknown
Function polypeptide composition of the spore coat
Gene expression levels in SubtiExpress: cotJA
Interactions involving this protein in SubtInteract: CotJA
MW, pI 9 kDa, 9.196
Gene length, protein length 246 bp, 82 aa
Immediate neighbours yesF, cotJB
Sequences Protein DNA Advanced_DNA
Genetic context
CotJA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CotJA expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon, SpoIIID regulon

The gene

Basic information

  • Locus tag: BSU06890

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

R W Seyler, A O Henriques, A J Ozin, C P Moran
Assembly and interactions of cotJ-encoded proteins, constituents of the inner layers of the Bacillus subtilis spore coat.
Mol Microbiol: 1997, 25(5);955-66
[PubMed:9364920] [WorldCat.org] [DOI] (P p)

A O Henriques, B W Beall, K Roland, C P Moran
Characterization of cotJ, a sigma E-controlled operon affecting the polypeptide composition of the coat of Bacillus subtilis spores.
J Bacteriol: 1995, 177(12);3394-406
[PubMed:7768848] [WorldCat.org] [DOI] (P p)