Difference between revisions of "ComFC"

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=Expression and regulation=
 
=Expression and regulation=
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* '''Operon:''' ''[[comFA]]-[[comFB]]-[[comFC]]-[[yvyF]]-[[flgM]]-[[yvyG]]-[[flgK]]-[[flgL]]'' {{PubMed|8412657}}
  
* '''Operon:'''  
+
* '''[[Sigma factor]]:''' ''[[comFA]]'': [[SigA]] {{PubMed|8412657}}
 
 
* '''[[Sigma factor]]:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[ComK]]: transcription activation {{PubMed|8412657}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  

Revision as of 21:44, 30 December 2009

  • Description: late competence gene

Gene name comFC
Synonyms
Essential no
Product unknown
Function compentence
MW, pI 26 kDa, 8.851
Gene length, protein length 687 bp, 229 aa
Immediate neighbours yvyF, comFB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
ComFC context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU35450

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: comF/gntX family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hanne Jarmer, Randy Berka, Steen Knudsen, Hans H Saxild
Transcriptome analysis documents induced competence of Bacillus subtilis during nitrogen limiting conditions.
FEMS Microbiol Lett: 2002, 206(2);197-200
[PubMed:11814663] [WorldCat.org] [DOI] (P p)

J A Londoño-Vallejo, D Dubnau
comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.
Mol Microbiol: 1993, 9(1);119-31
[PubMed:8412657] [WorldCat.org] [DOI] (P p)