Difference between revisions of "Cofactors"

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(FAD)
Line 69: Line 69:
 
* [[TrmFO]]
 
* [[TrmFO]]
 
* [[TrxB]]
 
* [[TrxB]]
 
+
* [[YdbM]]
 
* [[YcgT]]
 
* [[YcgT]]
 +
* [[YdaP]]
 +
* [[YetM]]
 
* [[YetO]]
 
* [[YetO]]
 +
* [[YgaK]]
 +
* [[YhjG]]
 
* [[YitJ]]
 
* [[YitJ]]
 +
* [[YitY]]
 +
* [[YjlD]]
 +
 
* [[YkuN]]
 
* [[YkuN]]
 
* [[YkuP]]
 
* [[YkuP]]
 
* [[YngJ]]
 
* [[YngJ]]
 +
 +
* [[YsfC]]
 
* [[YumC]]
 
* [[YumC]]
* [[YsfC]]
 
  
 
= FMN =
 
= FMN =
Line 91: Line 99:
 
* [[YclD]]
 
* [[YclD]]
 
* [[YcnD]]
 
* [[YcnD]]
* [[YdbM]]
+
 
 
* [[YddN]]
 
* [[YddN]]
 
* [[YdeQ]]
 
* [[YdeQ]]
 
* [[YdfE]]
 
* [[YdfE]]
 
* [[YerD]]
 
* [[YerD]]
* [[YetM]]
+
 
 
* [[Nos]]
 
* [[Nos]]
  

Revision as of 13:14, 10 May 2019

NAD+

NADP+

FAD

FMN

Additional Flavoproteins

Peter Macheroux, Barbara Kappes, Steven E Ealick
Flavogenomics--a genomic and structural view of flavin-dependent proteins.
FEBS J: 2011, 278(15);2625-34
[PubMed:21635694] [WorldCat.org] [DOI] (I p)


S-adenosyl-L-methionine (SAM)

Biotin

Cobalamin

Calcium

Copper

Nickel

Mark A Farrugia, Lee Macomber, Robert P Hausinger
Biosynthesis of the urease metallocenter.
J Biol Chem: 2013, 288(19);13178-85
[PubMed:23539618] [WorldCat.org] [DOI] (I p)

Harini Kaluarachchi, Kim C Chan Chung, Deborah B Zamble
Microbial nickel proteins.
Nat Prod Rep: 2010, 27(5);681-94
[PubMed:20442959] [WorldCat.org] [DOI] (I p)

Stephen W Ragsdale
Nickel-based Enzyme Systems.
J Biol Chem: 2009, 284(28);18571-5
[PubMed:19363030] [WorldCat.org] [DOI] (P p)


Magnesium

Manganese

dimanganic-tyrosyl radical cofactor

Zinc

MoCo (molybdenum cofactor, molybdopterin)

Iron-sulfur cluster

[2 Fe-2 S] cluster

Heme A

Heme b

Heme d

Protoheme IX

Heme (unspecified )

Thiamine pyrophosphate, TPP

E1 subunits of ketoacid dehydrogenases/ acetoin dehydrogenase

Lipoic acid

E2 subunits of ketoacid dehydrogenases/ acetoin dehydrogenase

H protein of the glycine cleavage system

  • GcvH (also required for LipL-catalyzed octanoyl transfer from AcpA to the E2s)

Pyridoxyl phosphate, PLP

Tetrahydrofalate

Methylene-THF