Difference between revisions of "Cofactors"

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Line 13: Line 13:
 
* [[GudB]]
 
* [[GudB]]
 
* [[Mdh]]
 
* [[Mdh]]
 +
* [[MelA]]
 
* [[NasE]]
 
* [[NasE]]
 
* [[RhaEW]]
 
* [[RhaEW]]
 
* [[Tdh]]
 
* [[Tdh]]
 +
* [[TyrA]]
 
* [[YcbD]]
 
* [[YcbD]]
  
Line 22: Line 24:
 
* [[GapB]]
 
* [[GapB]]
 
* [[Hom]]
 
* [[Hom]]
 +
* [[HypO]]
 
* [[Icd]]
 
* [[Icd]]
 
* [[IolW]]
 
* [[IolW]]
Line 35: Line 38:
 
* [[YqkF]]
 
* [[YqkF]]
 
* [[YtsJ]]
 
* [[YtsJ]]
 +
* [[YvgN]]
  
 
= FAD =
 
= FAD =
Line 79: Line 83:
 
* [[YitY]]
 
* [[YitY]]
 
* [[YjlD]]
 
* [[YjlD]]
* [[YkuP]]
 
 
* [[YngJ]]
 
* [[YngJ]]
 
* [[YoaI]]
 
* [[YoaI]]
Line 153: Line 156:
  
 
= Magnesium=
 
= Magnesium=
 +
* [[ExoR]]
 
* [[FosB]]
 
* [[FosB]]
 
* [[HutP]]
 
* [[HutP]]
 +
* [[KtrA]]
 
* [[MrfB]]
 
* [[MrfB]]
 
* [[YwpJ]]
 
* [[YwpJ]]
Line 169: Line 174:
 
* [[DisA]]
 
* [[DisA]]
 
* [[LplD]]
 
* [[LplD]]
 +
* [[MelA]]
 +
* [[MutT]]
 
* [[NrdF]]
 
* [[NrdF]]
 
* [[NrnA]]
 
* [[NrnA]]
Line 178: Line 185:
 
* [[RnhC]]
 
* [[RnhC]]
 
* [[SpoIIE]]
 
* [[SpoIIE]]
 +
* [[YhfI]]
 
* [[YpgQ]]
 
* [[YpgQ]]
 +
* [[YvcI]]
 
== dimanganic-tyrosyl radical cofactor ==
 
== dimanganic-tyrosyl radical cofactor ==
 
* [[NrdF]]
 
* [[NrdF]]
  
 
= Zinc =
 
= Zinc =
 +
* [[BshB1]]
 
* [[ComFA]]
 
* [[ComFA]]
 
* [[ComFB]]
 
* [[ComFB]]
Line 363: Line 373:
 
* [[YtkP]]
 
* [[YtkP]]
 
* [[YwaA]]
 
* [[YwaA]]
 +
<pubmed>    31134210</pubmed>
  
 
= Tetrahydrofalate =
 
= Tetrahydrofalate =

Revision as of 11:22, 27 December 2019

NAD+

NADP+

FAD

FMN

Additional Flavoproteins

Peter Macheroux, Barbara Kappes, Steven E Ealick
Flavogenomics--a genomic and structural view of flavin-dependent proteins.
FEBS J: 2011, 278(15);2625-34
[PubMed:21635694] [WorldCat.org] [DOI] (I p)


S-adenosyl-L-methionine (SAM)

Biotin

Cobalamin

Calcium

Copper

Nickel

Mark A Farrugia, Lee Macomber, Robert P Hausinger
Biosynthesis of the urease metallocenter.
J Biol Chem: 2013, 288(19);13178-85
[PubMed:23539618] [WorldCat.org] [DOI] (I p)

Harini Kaluarachchi, Kim C Chan Chung, Deborah B Zamble
Microbial nickel proteins.
Nat Prod Rep: 2010, 27(5);681-94
[PubMed:20442959] [WorldCat.org] [DOI] (I p)

Stephen W Ragsdale
Nickel-based Enzyme Systems.
J Biol Chem: 2009, 284(28);18571-5
[PubMed:19363030] [WorldCat.org] [DOI] (P p)


Magnesium

Manganese

dimanganic-tyrosyl radical cofactor

Zinc

MoCo (molybdenum cofactor, molybdopterin)

Iron-sulfur cluster

[2 Fe-2 S] cluster

Heme A

Heme b

Heme d

Protoheme IX

Heme (unspecified )

Thiamine pyrophosphate, TPP

E1 subunits of ketoacid dehydrogenases/ acetoin dehydrogenase

Lipoic acid

E2 subunits of ketoacid dehydrogenases/ acetoin dehydrogenase

H protein of the glycine cleavage system

  • GcvH (also required for LipL-catalyzed octanoyl transfer from AcpA to the E2s)

Pyridoxyl phosphate, PLP

Björn Richts, Jonathan Rosenberg, Fabian M Commichau
##Title##
Front Mol Biosci: 2019, 6;32
[PubMed:31134210] [WorldCat.org] [DOI] (P e)


Tetrahydrofalate

Methylene-THF