Difference between revisions of "CodY regulon"

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(Repression)
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* ''[[appD]]''
 
* ''[[appD]]''
 
* ''[[appF]]''
 
* ''[[appF]]''
 +
* ''[[aprE]]''
 
* ''[[argC]]-[[argJ]]-[[argB]]-[[argD]]-[[carA]]-[[carB]]-[[argF]]''
 
* ''[[argC]]-[[argJ]]-[[argB]]-[[argD]]-[[carA]]-[[carB]]-[[argF]]''
 
* ''[[asnH]]''
 
* ''[[asnH]]''
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* ''[[bcaP]]''
 
* ''[[bcaP]]''
 
* ''[[bkdR]]''
 
* ''[[bkdR]]''
 +
* ''[[braB]]''
 
* ''[[citB]]''
 
* ''[[citB]]''
 
* ''[[clpQ]]''
 
* ''[[clpQ]]''
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* ''[[kapB]]''
 
* ''[[kapB]]''
 
* ''[[kinB]]''
 
* ''[[kinB]]''
 +
* ''[[mpr]]''
 +
* ''[[nprE]]''
 
* ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]''
 
* ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]''
 +
* ''[[oppA]]-[[oppB]]-[[oppC]]-[[oppD]]-[[oppF]]''
 
* ''[[phrA]]''
 
* ''[[phrA]]''
 
* ''[[phrC]]''
 
* ''[[phrC]]''
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* ''[[rocA]]-[[rocB]]-[[rocC]]''
 
* ''[[rocA]]-[[rocB]]-[[rocC]]''
 
* ''[[rocD]]-[[rocE]]-[[rocF]]''
 
* ''[[rocD]]-[[rocE]]-[[rocF]]''
 +
* ''[[scoC]]''
 
* ''[[srfAA]]-[[srfAB]]-[[comS]]-[[srfAC]]-[[srfAD]]''
 
* ''[[srfAA]]-[[srfAB]]-[[comS]]-[[srfAC]]-[[srfAD]]''
 +
* ''[[thrD]]''
 
* ''[[ureA]]-[[ureB]]-[[ureC]]''
 
* ''[[ureA]]-[[ureB]]-[[ureC]]''
 +
* ''[[vpr]]''
 
* ''[[ybgE]]''
 
* ''[[ybgE]]''
 
* ''[[ycgA]]''
 
* ''[[ycgA]]''
 +
 
* ''[[yhjC]]''
 
* ''[[yhjC]]''
 
* ''[[ykfA]]''
 
* ''[[ykfA]]''

Latest revision as of 17:43, 5 June 2016

Regulator

CodY

Genes in this regulon

Activation

Repression

Important publications on the CodY regulon

Shaun R Brinsmade, Elizabeth L Alexander, Jonathan Livny, Arion I Stettner, Daniel Segrè, Kyu Y Rhee, Abraham L Sonenshein
Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY.
Proc Natl Acad Sci U S A: 2014, 111(22);8227-32
[PubMed:24843172] [WorldCat.org] [DOI] (I p)

Tobias Geiger, Christiane Wolz
Intersection of the stringent response and the CodY regulon in low GC Gram-positive bacteria.
Int J Med Microbiol: 2014, 304(2);150-5
[PubMed:24462007] [WorldCat.org] [DOI] (I p)

Boris R Belitsky, Abraham L Sonenshein
Genome-wide identification of Bacillus subtilis CodY-binding sites at single-nucleotide resolution.
Proc Natl Acad Sci U S A: 2013, 110(17);7026-31
[PubMed:23569278] [WorldCat.org] [DOI] (I p)

Boris R Belitsky, Abraham L Sonenshein
Genetic and biochemical analysis of CodY-binding sites in Bacillus subtilis.
J Bacteriol: 2008, 190(4);1224-36
[PubMed:18083814] [WorldCat.org] [DOI] (I p)

Abraham L Sonenshein
Control of key metabolic intersections in Bacillus subtilis.
Nat Rev Microbiol: 2007, 5(12);917-27
[PubMed:17982469] [WorldCat.org] [DOI] (I p)

Abraham L Sonenshein
CodY, a global regulator of stationary phase and virulence in Gram-positive bacteria.
Curr Opin Microbiol: 2005, 8(2);203-7
[PubMed:15802253] [WorldCat.org] [DOI] (P p)

Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455] [WorldCat.org] [DOI] (P p)


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