Difference between revisions of "CinA"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:''' competence-damage inducible protein <br/><br/>
+
* '''Description:''' plays a nucleoid-associated general role in cells entering stationary phase  <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || competence-damage inducible protein
+
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || genetic transformation
+
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 45 kDa, 5.403   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 45 kDa, 5.403   
Line 74: Line 74:
 
* '''Interactions:'''
 
* '''Interactions:'''
  
* '''Localization:'''
+
* '''Localization:''' associated with the nucleoid {{PubMed|20480359}}
  
 
=== Database entries ===
 
=== Database entries ===
Line 95: Line 95:
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** induced during stationary phase {{PubMed|20480359}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 119: Line 120:
  
 
=References=
 
=References=
 
+
<pubmed> 20480359 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 09:14, 19 May 2010

  • Description: plays a nucleoid-associated general role in cells entering stationary phase

Gene name cinA
Synonyms ymfO, yzlB
Essential no
Product unknown
Function unknown
MW, pI 45 kDa, 5.403
Gene length, protein length 1248 bp, 416 aa
Immediate neighbours pgsA, recA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CinA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU16930

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: cinA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: associated with the nucleoid PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
    • induced during stationary phase PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Christine Kaimer, Peter L Graumann
Bacillus subtilis CinA is a stationary phase-induced protein that localizes to the nucleoid and plays a minor role in competent cells.
Arch Microbiol: 2010, 192(7);549-57
[PubMed:20480359] [WorldCat.org] [DOI] (I p)