Difference between revisions of "Buk"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lpdV]]'', ''[[bcd]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lpdV]]'', ''[[bcd]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24070 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24070 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24070 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24070 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24070 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24070 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:buk_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:buk_context.gif]]

Revision as of 10:40, 14 May 2013

  • Description: butyrate kinase

Gene name buk
Synonyms yqiU, bkd
Essential no
Product butyrate kinase
Function utilization of branched-chain keto acids
Gene expression levels in SubtiExpress: buk
Metabolic function and regulation of this protein in SubtiPathways:
Lipid synthesis, Ile, Leu, Val
MW, pI 39 kDa, 5.466
Gene length, protein length 1089 bp, 363 aa
Immediate neighbours lpdV, bcd
Sequences Protein DNA DNA_with_flanks
Genetic context
Buk context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Buk expression.png





























Categories containing this gene/protein

utilization of amino acids

This gene is a member of the following regulons

BkdR regulon, CodY regulon, SigL regulon

The gene

Basic information

  • Locus tag: BSU24070

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + butanoate = ADP + butanoyl phosphate (according to Swiss-Prot)
  • Protein family: acetokinase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1X9J (from Thermotoga maritima, 52% identity, 69% similarity)
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • induced in the presence of isoleucine or valine (BkdR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References