Difference between revisions of "BsrF"
| Line 6: | Line 6: | ||
|''bsrF'' | |''bsrF'' | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''SR2 '' |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
| Line 50: | Line 50: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''bsrF'' |
| − | * '''Sigma factor:''' | + | * '''Sigma factor:''' [[SigA]] |
| − | * '''Regulation:''' | + | * '''Regulation:''' weakly activated by [[CodY]] |
| − | * '''Regulatory mechanism:''' | + | * '''Regulatory mechanism:''' [[CodY]]: transcription activation |
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 77: | Line 77: | ||
=References= | =References= | ||
| − | <pubmed>18948176, </pubmed> | + | <pubmed>18948176, 19542274 </pubmed> |
Revision as of 07:03, 25 June 2009
- Description: small RNA
| Gene name | bsrF |
| Synonyms | SR2 |
| Essential | no |
| Product | small RNA |
| Function | unknown |
| Gene length | bp |
| Immediate neighbours | yobO, csaA |
| Gene sequence (+200bp) | |
| Genetic context File:GenE context.gif | |
Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: no entry
- Structure:
Additional information
Expression and regulation
- Operon: bsrF
- Sigma factor: SigA
- Regulation: weakly activated by CodY
- Regulatory mechanism: CodY: transcription activation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
Labs working on this gene/RNA
Kouji Nakamura, Tsukuba, University, Japan
Your additional remarks
References
Heike Preis, Rita A Eckart, Rajani K Gudipati, Nadja Heidrich, Sabine Brantl
CodY activates transcription of a small RNA in Bacillus subtilis.
J Bacteriol: 2009, 191(17);5446-57
[PubMed:19542274]
[WorldCat.org]
[DOI]
(I p)
Shinichi Saito, Hiroshi Kakeshita, Kouji Nakamura
Novel small RNA-encoding genes in the intergenic regions of Bacillus subtilis.
Gene: 2009, 428(1-2);2-8
[PubMed:18948176]
[WorldCat.org]
[DOI]
(P p)
