Difference between revisions of "BsrA"

From SubtiWiki
Jump to: navigation, search
Line 83: Line 83:
  
 
<pubmed>15811922,,12177353 15811922, </pubmed>
 
<pubmed>15811922,,12177353 15811922, </pubmed>
# Suzuma S, Asari S, Bunai K, Yoshino K, Ando Y, Kakeshita H, Fujita M, Nakamura K, Yamane K (2002) Identification and characterization of novel small RNAs in the ''aspS-yrvM'' intergenic region of the ''Bacillus subtilis'' genome.. ''Microbiology'' '''148:''' 2591-2598. [http://www.ncbi.nlm.nih.gov/sites/entrez/12177353 PubMed]
 
# Barrick JE, Sudarsan N, Weinberg Z, Ruzzo WL, Breaker RR(2005) 6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter.''RNA'' '''11:''' 774-784. [http://www.ncbi.nlm.nih.gov/sites/entrez/15811922 PubMed]
 
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
 

Revision as of 00:31, 16 June 2009

  • Description: 6S RNA

Gene name bsrA
Synonyms
Essential no
Product 6S RNA
Function antagonist of SigA
Gene length 190 bp
Immediate neighbours yrvM, aspS
Gene sequence (+200bp)
Genetic context
BsrA context.jpeg








The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

reduced growth rate PubMed


Database entries

  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • Structure:

Additional information

Expression and regulation

  • Regulation: expressed in vegetative cells PubMed
  • Regulatory mechanism:
  • Additional information: transcribed as 201 nt RNA, processed to mature 190 bp 6S RNA PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:


Labs working on this gene/RNA

Kouji Nakamura, Tsukuba, University, Japan

Roland Hartmann, Philipps-Universität Marburg, Marburg, Germany, Homepage

Your additional remarks

References

Jeffrey E Barrick, Narasimhan Sudarsan, Zasha Weinberg, Walter L Ruzzo, Ronald R Breaker
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter.
RNA: 2005, 11(5);774-84
[PubMed:15811922] [WorldCat.org] [DOI] (P p)

Satoru Suzuma, Sayaka Asari, Keigo Bunai, Keiko Yoshino, Yoshinari Ando, Hiroshi Kakeshita, Masaya Fujita, Kouji Nakamura, Kunio Yamane
Identification and characterization of novel small RNAs in the aspS-yrvM intergenic region of the Bacillus subtilis genome.
Microbiology (Reading): 2002, 148(Pt 8);2591-2598
[PubMed:12177353] [WorldCat.org] [DOI] (P p)