Difference between revisions of "BsdC"

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* '''Description:''' phenolic acid decarboxylase <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to salicylic acid
 
|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to salicylic acid
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU03640 bsdC]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 52 kDa, 5.116   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 52 kDa, 5.116   

Revision as of 15:02, 6 August 2012


Gene name bsdC
Synonyms yclC
Essential no
Product phenolic acid decarboxylase
Function resistance to salicylic acid
Gene expression levels in SubtiExpress: bsdC
MW, pI 52 kDa, 5.116
Gene length, protein length 1419 bp, 473 aa
Immediate neighbours bsdB, bsdD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YclC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
BsdC expression.png
























Categories containing this gene/protein

resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)

This gene is a member of the following regulons

BsdA regulon

The gene

Basic information

  • Locus tag: BSU03640

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ubiD family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: induced by salicylic acid (BsdA) PubMed
  • Regulatory mechanism: BsdA: transcription activation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Nguyen Van Duy, Ulrike Mäder, Ngoc Phuong Tran, Jean-François Cavin, Le Thi Tam, Dirk Albrecht, Michael Hecker, Haike Antelmann
The proteome and transcriptome analysis of Bacillus subtilis in response to salicylic acid.
Proteomics: 2007, 7(5);698-710
[PubMed:17295427] [WorldCat.org] [DOI] (P p)

Boguslaw Lupa, Delina Lyon, Moreland D Gibbs, Rosalind A Reeves, Juergen Wiegel
Distribution of genes encoding the microbial non-oxidative reversible hydroxyarylic acid decarboxylases/phenol carboxylases.
Genomics: 2005, 86(3);342-51
[PubMed:15979273] [WorldCat.org] [DOI] (P p)