Difference between revisions of "BlyA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || SPß-mediated lysis
 
|style="background:#ABCDEF;" align="center"|'''Function''' || SPß-mediated lysis
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU21410 blyA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21410 blyA]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 39 kDa, 9.935   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 39 kDa, 9.935   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yomD]]'', ''[[bhlA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yomD]]'', ''[[bhlA]]''
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14059&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU21410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU21410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU21410 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:blyA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:blyA_context.gif]]

Revision as of 13:05, 13 May 2013

  • Description: N-acetylmuramoyl-L-alanine amidase

Gene name blyA
Synonyms yomC
Essential no
Product N-acetylmuramoyl-L-alanine amidase
Function SPß-mediated lysis
Gene expression levels in SubtiExpress: blyA
MW, pI 39 kDa, 9.935
Gene length, protein length 1101 bp, 367 aa
Immediate neighbours yomD, bhlA
Sequences Protein DNA Advanced_DNA
Genetic context
BlyA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
BlyA expression.png
























Categories containing this gene/protein

cell wall degradation/ turnover, SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21410

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexandre Regamey, Dimitri Karamata
The N-acetylmuramoyl-L-alanine amidase encoded by the Bacillus subtilis 168 prophage SP beta.
Microbiology (Reading): 1998, 144 ( Pt 4);885-893
[PubMed:9579063] [WorldCat.org] [DOI] (P p)