Difference between revisions of "BkdR"

From SubtiWiki
Jump to: navigation, search
Line 36: Line 36:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU24100
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 83: Line 83:
 
* '''Swiss prot entry:'''
 
* '''Swiss prot entry:'''
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU24100 BSU24100]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU24100]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 13:36, 3 June 2009

Gene name bkdR
Synonyms yqiR
Essential no
Product transcriptional activator (for SigL-dependent promoter))
Function regulation of branched-chain amino acid utilization,

required for survival at low temperatures)

MW, pI 77 kDa, 6.237
Gene length, protein length 2076 bp, 692 aa
Immediate neighbours ptb, yqzF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
BkdR context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Locus tag: BSU24100

Phenotypes of a mutant

The mutant is cold-sensitive PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Wiegeshoff et al. (2006) Sigma L is important for cold shock adaptation of Bacillus subtilis. J Bacteriol , 188: 3130-3133. PubMed