yocS

168

similar to sodium-dependent bile acid transporter

locus: BSU_19350

Molecular weight: 34.10 kDa

pI: 10.18

Protein length: 321 aa

Gene length: 966 bp

function: unknown

product: putative sodium-dependent transporter

essential: no

synonyms: yocS

List of homologs in different organisms, belongs to COG0385 (Galperin et al., 2021)

Gene

Coordinates: 2,106,490 → 2,107,455

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The protein

Protein family

• bile acid:sodium symporter (BASS) (TC 2.A.28) family (single member, according to UniProt)

Structure

• [PDB|3ZUY] (from Neisseria meningitidis, 55% identity) [pubmed|21976025]
• [AF|O34524]

[wiki|Localization]

• membrane associated [Pubmed|18763711]

Expression and Regulation

Operons

• genes: [gene|F4EFFEA5B4622C3016121EF07114EEC5ED6C81D8|yocS]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B420 (yocS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1419 NBRP B. subtilis, Japan]
• BKE19350 (Δ[gene|F4EFFEA5B4622C3016121EF07114EEC5ED6C81D8|yocS]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19350 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATAAAAACACTCCTAACAC,  downstream forward: _UP4_TAAATATGCATCAAAAAGGG
• BKK19350 (Δ[gene|F4EFFEA5B4622C3016121EF07114EEC5ED6C81D8|yocS]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19350 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATAAAAACACTCCTAACAC,  downstream forward: _UP4_TAAATATGCATCAAAAAGGG

References

• 18763711,21976025