ybfP

ybfP
168

similar to transcription factor ([wiki|AraC family])

locus
BSU_02320
Molecular weight
34.06 kDa
pI
6.28
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ybfP

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2207 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
251,427  252,314
Visit Sartorius.com Visit Sartorius.com
Advertisement
The protein
Protein family
[wiki|AraC family]
[wiki|Domains]
[wiki|HTH araC/xylS-type domain] (aa 8-106) (according to UniProt)
Structure
[AF|O31456]
Expression and Regulation
Operons
genes
[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]-[gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]-[gene|E06787B6AAD11070751938822F75359CE6EF299C|ybfQ]
description
[Pubmed|12207695]
regulation
repressed during logarithmic growth ([protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]) [Pubmed|18840696]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|18840696,20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
sigma factors
[protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW]: sigma factor, [Pubmed|11866510,12207695], in [regulon|protein:3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|sigW regulon]
Open in new tab

[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]→[gene|E06787B6AAD11070751938822F75359CE6EF299C|ybfQ]

2024-03-15 23:32:48

Jstuelk

67

50a945625df291fbb5df9027fa7857ca92a76e0e

38EAB2C0FEF8D67A055D05FB47AFE694C464191E

genes
[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]-[gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]
description
[Pubmed|20817675]
regulation
repressed during logarithmic growth ([protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]) [Pubmed|18840696]
Open in new tab

[gene|BA60CF44ECA4937FA5C1720B10E7FDABA9AB4664|ybfO]→[gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]

2024-03-03 17:21:07

Jstuelk

40

fe15add8629dec9297e9ad34a6ce932400a411a1

44F8E545FEA0CBD4F342C5F2356F2692EFBA9996

Biological materials
Mutant
BKE02320 ([gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02320 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGCACGCTCCAATCTCC,  downstream forward: _UP4_TAGTTTTCAGACAACTACTT
BKK02320 ([gene|1EE8BF589ECDFD5194C86E02A627CCF81899B904|ybfP]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02320 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGCACGCTCCAATCTCC,  downstream forward: _UP4_TAGTTTTCAGACAACTACTT
References
12207695,20817675,23504016

1EE8BF589ECDFD5194C86E02A627CCF81899B904

Page visits: 1507

Time of last update: 2024-03-28 04:47:02

Author of last update: Melvin.boenninger