Difference between revisions of "AseA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to arsenite
 
|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to arsenite
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU05340 aseA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU05340 aseA]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH metal ion homeostasis]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH metal ion homeostasis]'''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[aseR]]'', ''[[ydzS/1]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[aseR]]'', ''[[ydzS/1]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB12341&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU05340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU05340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU05340 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ydfA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ydfA_context.gif]]

Revision as of 12:13, 13 May 2013

  • Description: As(III) efflux pump

Gene name aseA
Synonyms ydfA
Essential no
Product As(III) efflux pump
Function resistance to arsenite
Gene expression levels in SubtiExpress: aseA
Metabolic function and regulation of this protein in SubtiPathways:
metal ion homeostasis
MW, pI 47 kDa, 8.968
Gene length, protein length 1305 bp, 435 aa
Immediate neighbours aseR, ydzS/1
Sequences Protein DNA Advanced_DNA
Genetic context
YdfA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AseA expression.png
























Categories containing this gene/protein

transporters/ other, resistance against toxic metals

This gene is a member of the following regulons

AseR regulon

The gene

Basic information

  • Locus tag: BSU05340

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YwrK

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Charles M Moore, Ahmed Gaballa, Monica Hui, Rick W Ye, John D Helmann
Genetic and physiological responses of Bacillus subtilis to metal ion stress.
Mol Microbiol: 2005, 57(1);27-40
[PubMed:15948947] [WorldCat.org] [DOI] (P p)