Difference between revisions of "ArtR"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23960&redirect=T BSU23960]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 99: Line 100:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23960&redirect=T BSU23960]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2Q0H 2Q0H] (in complex with ADP-Mg2+, Geobacillus stearothermophilus, 63% identity)
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2Q0H 2Q0H] (in complex with ADP-Mg2+, Geobacillus stearothermophilus, 63% identity)

Revision as of 14:09, 2 April 2014

  • Description: high affinity arginine ABC transporter (ATP-binding protein)

Gene name artR
Synonyms yqiZ
Essential no
Product high affinity arginine ABC transporter (ATP-binding protein)
Function arginine uptake
Gene expression levels in SubtiExpress: artR
Interactions involving this protein in SubtInteract: ArtR
Metabolic function and regulation of this protein in SubtiPathways:
artR
MW, pI 26 kDa, 9.131
Gene length, protein length 720 bp, 240 aa
Immediate neighbours yqjA, artQ
Sequences Protein DNA DNA_with_flanks
Genetic context
YqiZ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
ArtR expression.png




























Categories containing this gene/protein

ABC transporters, biosynthesis/ acquisition of amino acids, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU23960

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: attached to the membrane via ArtQ PubMed

Database entries

  • Structure: 2Q0H (in complex with ADP-Mg2+, Geobacillus stearothermophilus, 63% identity)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)

A Sekowska, S Robin, J J Daudin, A Hénaut, A Danchin
Extracting biological information from DNA arrays: an unexpected link between arginine and methionine metabolism in Bacillus subtilis.
Genome Biol: 2001, 2(6);RESEARCH0019
[PubMed:11423008] [WorldCat.org] [DOI] (I p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)