Difference between revisions of "AldY"

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* '''Description:''' aldehyde dehydrogenase (NAD), general stress protein <br/><br/>
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* '''Description:''' aldehyde dehydrogenase (NAD), general stress protein, required for protection against paraquat stress  <br/><br/>
  
 
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<br/><br/><br/><br/>
 
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}},
 
{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}},
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{{SubtiWiki category|[[resistance against oxidative and electrophile stress]]}},
 
{{SubtiWiki category|[[poorly characterized/ putative enzymes]]}}
 
{{SubtiWiki category|[[poorly characterized/ putative enzymes]]}}
  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=aldY_3986428_3987885_1 aldY] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=aldY_3986428_3987885_1 aldY] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigB]] {{PubMed|10482513}}  
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* '''[[Sigma factor]]:''' [[SigB]] {{PubMed|10482513}}  
  
 
* '''Regulation:'''   
 
* '''Regulation:'''   
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=References=
 
=References=
  
<pubmed>15805528,10482513 </pubmed>
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<pubmed>15805528,10482513 22582280</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:32, 15 September 2013

  • Description: aldehyde dehydrogenase (NAD), general stress protein, required for protection against paraquat stress

Gene name aldY
Synonyms yxkE
Essential no
Product aldehyde dehydrogenase (NAD)
Function stress resistance
Gene expression levels in SubtiExpress: aldY
MW, pI 52 kDa, 5.021
Gene length, protein length 1455 bp, 485 aa
Immediate neighbours yxkF, yxkD
Sequences Protein DNA DNA_with_flanks
Genetic context
AldY context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AldY expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU38830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: aldehyde dehydrogenase family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexander Reder, Dirk Höper, Ulf Gerth, Michael Hecker
Contributions of individual σB-dependent general stress genes to oxidative stress resistance of Bacillus subtilis.
J Bacteriol: 2012, 194(14);3601-10
[PubMed:22582280] [WorldCat.org] [DOI] (I p)

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513] [WorldCat.org] [DOI] (P p)