Difference between revisions of "AbrB regulon"

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(Activation)
(Genes in this regulon)
Line 22: Line 22:
 
* ''[[gntR]]''
 
* ''[[gntR]]''
 
* ''[[gntZ]]''
 
* ''[[gntZ]]''
* ''[[pksC]]-[[pksD]]-[[pksE]]-[[acpK]]-[[pksF]]-[[pksG]]-[[pksH]]-[[pksI]]-[[pksJ]]-[[pksL]]-[[pksM]]-[[pksN]]-[[pksR]]''
 
 
* ''[[rbsA]]''
 
* ''[[rbsA]]''
 
* ''[[rbsB]]''
 
* ''[[rbsB]]''
Line 74: Line 73:
 
* ''[[phrK]]''
 
* ''[[phrK]]''
 
* ''[[phy]]''
 
* ''[[phy]]''
 +
* ''[[pksC]]-[[pksD]]-[[pksE]]-[[acpK]]-[[pksF]]-[[pksG]]-[[pksH]]-[[pksI]]-[[pksJ]]-[[pksL]]-[[pksM]]-[[pksN]]-[[pksR]]''
 
* ''[[pnbA]]''
 
* ''[[pnbA]]''
 
* ''[[ppsA]]''
 
* ''[[ppsA]]''

Revision as of 17:56, 18 December 2013

Regulator

AbrB

Genes in this regulon

Activation

Repression

Important publications on the AbrB regulon:

Onuma Chumsakul, Kensuke Nakamura, Tetsuya Kurata, Tomoaki Sakamoto, Jon L Hobman, Naotake Ogasawara, Taku Oshima, Shu Ishikawa
High-resolution mapping of in vivo genomic transcription factor binding sites using in situ DNase I footprinting and ChIP-seq.
DNA Res: 2013, 20(4);325-38
[PubMed:23580539] [WorldCat.org] [DOI] (I p)

Onuma Chumsakul, Hiroki Takahashi, Taku Oshima, Takahiro Hishimoto, Shigehiko Kanaya, Naotake Ogasawara, Shu Ishikawa
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
Nucleic Acids Res: 2011, 39(2);414-28
[PubMed:20817675] [WorldCat.org] [DOI] (I p)

Allison V Banse, Arnaud Chastanet, Lilah Rahn-Lee, Errett C Hobbs, Richard Losick
Parallel pathways of repression and antirepression governing the transition to stationary phase in Bacillus subtilis.
Proc Natl Acad Sci U S A: 2008, 105(40);15547-52
[PubMed:18840696] [WorldCat.org] [DOI] (I p)


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