AmiE

From SubtiWiki
Revision as of 08:54, 22 April 2014 by Julian (talk | contribs)
Jump to: navigation, search
  • Description: N-acetylmuramyl-L-alanine amidase

Gene name amiE
Synonyms ybbE
Essential no
Product N-acetylmuramyl-L-alanine amidase
Function recycling of cell wall material
Gene expression levels in SubtiExpress: amiE
Metabolic function and regulation of this protein in SubtiPathways:
amiE
MW, pI 49 kDa, 9.349
Gene length, protein length 1323 bp, 441 aa
Immediate neighbours nagZ, murP
Sequences Protein DNA DNA_with_flanks
Genetic context
YbbE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AmiE expression.png
























Categories containing this gene/protein

cell wall degradation/ turnover, sporulation/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU01670

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: hydrolyzes the amide bond between MurNAc and the L-alanine residue of the stem peptide PubMed
  • Protein family: UPF0214 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References