Difference between revisions of "YacO"

From SubtiWiki
Jump to: navigation, search
Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/Q06753 Q06753]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/Q06753 Q06753]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00960]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU00960 BSU00960]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 00:34, 14 May 2009

  • Description: similar to tRNA/ rRNA methyltransferase

Gene name yacO
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 27 kDa, 8.633
Gene length, protein length 747 bp, 249 aa
Immediate neighbours mrnC, yacP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YacO context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: RNA methyltransferase trmH family (according to Swiss-Prot)
  • Paralogous protein(s): YsgA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism: T-box, overlaps a transcription terminator upstream of cysE: transcription antitermination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed