Difference between revisions of "YpqE"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypqE_2336933_2337439_-1 ypqE] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypqE_2336933_2337439_-1 ypqE] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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=Biological materials =
 
=Biological materials =
  
* '''Mutant:''' QB6099 (aphA3), available in the [[Stülke]] lab
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* '''Mutant:'''  
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** QB6099 (aphA3), available in [[Jörg Stülke]]'s lab {{PubMed|10627040}}
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** BKE22230 (''ypqE''::''ermC'') (available at the [http://www.bgsc.org/ BGSC] and in [[Jörg Stülke]]'s lab)
  
 
* '''Expression vector:'''
 
* '''Expression vector:'''

Revision as of 17:01, 11 June 2014

  • Description: similar to PTS, EIIA component

Gene name ypqE
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ypqE
MW, pI 17 kDa, 5.294
Gene length, protein length 504 bp, 168 aa
Immediate neighbours yprA, ypqA
Sequences Protein DNA DNA_with_flanks
Genetic context
YpqE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YpqE expression.png















Categories containing this gene/protein

phosphotransferase systems, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22230

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: PTS permease, glucose permease (Glc) family PubMed
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 608 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 1331 PubMed

Biological materials

  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jonathan Reizer, Steffi Bachem, Aiala Reizer, Maryvonne Arnaud, Milton H Saier, Jörg Stülke
Novel phosphotransferase system genes revealed by genome analysis - the complete complement of PTS proteins encoded within the genome of Bacillus subtilis.
Microbiology (Reading): 1999, 145 ( Pt 12);3419-3429
[PubMed:10627040] [WorldCat.org] [DOI] (P p)