Difference between revisions of "YdaJ"

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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
* not available, the ''[[ydaJ]]-[[ydaK]]-[[ydaL]]-[[ydaM]]-[[ydaN]]'' operon may be essential {{PubMed|22821967}}
 
  
 
=== Database entries ===
 
=== Database entries ===
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=References=
 
=References=
<pubmed>22383849 22821967</pubmed>
+
<pubmed>22383849</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 09:35, 19 June 2013

  • Description: general stress protein of unknown function

Gene name ydaJ
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ydaJ
MW, pI 40 kDa, 4.901
Gene length, protein length 1086 bp, 362 aa
Immediate neighbours topB, ydaK
Sequences Protein DNA DNA_with_flanks
Genetic context
YdaJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdaJ expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB),

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU04270

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Pierre Nicolas, Ulrike Mäder, Etienne Dervyn, Tatiana Rochat, Aurélie Leduc, Nathalie Pigeonneau, Elena Bidnenko, Elodie Marchadier, Mark Hoebeke, Stéphane Aymerich, Dörte Becher, Paola Bisicchia, Eric Botella, Olivier Delumeau, Geoff Doherty, Emma L Denham, Mark J Fogg, Vincent Fromion, Anne Goelzer, Annette Hansen, Elisabeth Härtig, Colin R Harwood, Georg Homuth, Hanne Jarmer, Matthieu Jules, Edda Klipp, Ludovic Le Chat, François Lecointe, Peter Lewis, Wolfram Liebermeister, Anika March, Ruben A T Mars, Priyanka Nannapaneni, David Noone, Susanne Pohl, Bernd Rinn, Frank Rügheimer, Praveen K Sappa, Franck Samson, Marc Schaffer, Benno Schwikowski, Leif Steil, Jörg Stülke, Thomas Wiegert, Kevin M Devine, Anthony J Wilkinson, Jan Maarten van Dijl, Michael Hecker, Uwe Völker, Philippe Bessières, Philippe Noirot
Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis.
Science: 2012, 335(6072);1103-6
[PubMed:22383849] [WorldCat.org] [DOI] (I p)