Difference between revisions of "SufD"

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|style="background:#ABCDEF;" align="center"|'''Function''' || synthesis of Fe-S-clusters
 
|style="background:#ABCDEF;" align="center"|'''Function''' || synthesis of Fe-S-clusters
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU32700 sufD]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32700 sufD]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 4.951   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 4.951   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sufS]]'', ''[[sufC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sufS]]'', ''[[sufC]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15259&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32700 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32700 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32700 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yurX_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yurX_context.gif]]

Revision as of 13:47, 13 May 2013

  • Description: synthesis of Fe-S-clusters

Gene name sufD
Synonyms yurX
Essential yes PubMed
Product unknown
Function synthesis of Fe-S-clusters
Gene expression levels in SubtiExpress: sufD
MW, pI 48 kDa, 4.951
Gene length, protein length 1311 bp, 437 aa
Immediate neighbours sufS, sufC
Sequences Protein DNA Advanced_DNA
Genetic context
YurX context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SufD expression.png
























Categories containing this gene/protein

iron metabolism, essential genes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU32700

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Alexander G Albrecht, Daili J A Netz, Marcus Miethke, Antonio J Pierik, Olaf Burghaus, Florian Peuckert, Roland Lill, Mohamed A Marahiel
SufU is an essential iron-sulfur cluster scaffold protein in Bacillus subtilis.
J Bacteriol: 2010, 192(6);1643-51
[PubMed:20097860] [WorldCat.org] [DOI] (I p)

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)