Difference between revisions of "YrkA"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1302 bp, 434 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1302 bp, 434 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bltD]]'', ''[[yrdR]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bltD]]'', ''[[yrzO]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14602&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14602&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 08:53, 5 December 2012

  • Description: similar to hemolysin-like

Gene name yrkA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yrkA
MW, pI 48 kDa, 4.916
Gene length, protein length 1302 bp, 434 aa
Immediate neighbours bltD, yrzO
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YrkA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrkA expression.png
























Categories containing this gene/protein

lifestyles/ miscellaneous

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU26610

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: UPF0053 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References