Difference between revisions of "YfmT"

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* '''Description:''' similar to benzaldehyde dehydrogenase <br/><br/>
 
 
 
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Revision as of 10:28, 13 August 2012

  • Description: similar to benzaldehyde dehydrogenase

Gene name yfmT
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yfmT
MW, pI 53 kDa, 5.077
Gene length, protein length 1455 bp, 485 aa
Immediate neighbours yfnA, yfmS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfmT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfmT expression.png
























Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigD regulon

The gene

Basic information

  • Locus tag: BSU07350

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3RHH (from from Bacillus halodurans C-125 complexed with NADP, 32% identity, 67% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Masakuni Serizawa, Hiroki Yamamoto, Hirotake Yamaguchi, Yasutaro Fujita, Kazuo Kobayashi, Naotake Ogasawara, Junichi Sekiguchi
Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses.
Gene: 2004, 329;125-36
[PubMed:15033535] [WorldCat.org] [DOI] (P p)

Hiroki Yamamoto, Shigeki Uchiyama, Fajar Aji Nugroho, Junichi Sekiguchi
A 23.4 kb segment at the 69 degrees-70 degrees region of the Bacillus subtilis genome.
Microbiology (Reading): 1997, 143 ( Pt 4);1317-1320
[PubMed:9141694] [WorldCat.org] [DOI] (P p)