Difference between revisions of "KipR"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
m (Reverted edits by Jstuelk (talk) to last revision by 134.76.70.252)
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* '''Description:''' transcriptional repressor of the ''[[ycsF|kip]]'' operon <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of sporulation initiation
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of sporulation initiation
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU04100 kipR]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/phosphorelay.html Phosphorelay]'''
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|colspan="2" | '''Genetic context''' <br/> [[Image:kipR_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:kipR_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=kipR_461615_462367_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:kipR_expression.png|500px]]
 
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* '''Operon:''' ''[[ycsF]]-[[ycsG]]-[[ycsI]]-[[kipI]]-[[kipA]]-[[kipR]]-[[lipC]]'' {{PubMed|9334321}}  
 
* '''Operon:''' ''[[ycsF]]-[[ycsG]]-[[ycsI]]-[[kipI]]-[[kipA]]-[[kipR]]-[[lipC]]'' {{PubMed|9334321}}  
  
* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=kipR_461615_462367_1 kipR] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 11:59, 7 August 2012


Gene name kipR
Synonyms ycsO
Essential no
Product transcriptional regulator
Function regulation of sporulation initiation
Gene expression levels in SubtiExpress: kipR
Function and regulation of this protein in SubtiPathways:
Phosphorelay
MW, pI 27 kDa, 5.435
Gene length, protein length 738 bp, 246 aa
Immediate neighbours kipA, lipC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
KipR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
KipR expression.png




























Categories containing this gene/protein

transcription factors and their control, phosphorelay

This gene is a member of the following regulons

KipR regulon, TnrA regulon

The KipR regulon:

The gene

Basic information

  • Locus tag: BSU04100

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References