Difference between revisions of "YfjR"

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* '''Description:''' similar to 3-hydroxyisobutyrate dehydrogenase <br/><br/>
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU07990 yfjR]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.782   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.782   

Revision as of 16:00, 6 August 2012


Gene name yfjR
Synonyms
Essential no
Product 3-hydroxyisobutyrate dehydrogenase
Function unknown
Gene expression levels in SubtiExpress: yfjR
MW, pI 27 kDa, 4.782
Gene length, protein length 783 bp, 261 aa
Immediate neighbours pdaA, yfjQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfjR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfjR expression.png
























Categories containing this gene/protein

phosphoproteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

YclJ regulon

The gene

Basic information

  • Locus tag: BSU07990

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 3-hydroxyisobutyrate dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s): YkwC

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated on ser/ thr/ tyr PubMed
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yfjR (according to DBTBS)
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mitsuo Ogura, Kensuke Tsukahara, Teruo Tanaka
Identification of the sequences recognized by the Bacillus subtilis response regulator YclJ.
Arch Microbiol: 2010, 192(7);569-80
[PubMed:20512483] [WorldCat.org] [DOI] (I p)

Alain Lévine, Françoise Vannier, Cédric Absalon, Lauriane Kuhn, Peter Jackson, Elaine Scrivener, Valérie Labas, Joëlle Vinh, Patrick Courtney, Jérôme Garin, Simone J Séror
Analysis of the dynamic Bacillus subtilis Ser/Thr/Tyr phosphoproteome implicated in a wide variety of cellular processes.
Proteomics: 2006, 6(7);2157-73
[PubMed:16493705] [WorldCat.org] [DOI] (P p)