Difference between revisions of "RpmF"

From SubtiWiki
Jump to: navigation, search
Line 109: Line 109:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[ylbN]]-[[rpmF]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rpmF_1575804_1575983_1 rpmF] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rpmF_1575804_1575983_1 rpmF] {{PubMed|22383849}}
Line 141: Line 141:
  
 
=References=
 
=References=
<pubmed>19653700 </pubmed>
+
<pubmed>19653700 22383849 11948165</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:05, 21 April 2012

Gene name rpmF
Synonyms
Essential yes PubMed
Product ribosomal protein L32
Function translation
Interactions involving this protein in SubtInteract: RpmF
MW, pI 6 kDa, 10.768
Gene length, protein length 177 bp, 59 aa
Immediate neighbours ylbN, gerR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RpmF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmF expression.png
























Categories containing this gene/protein

translation, essential genes

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU15080

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References