Difference between revisions of "Main Page"

From SubtiWiki
Jump to: navigation, search
Line 16: Line 16:
  
 
<br/>
 
<br/>
<big>'''Now online: A description of ''Subti''Wiki, ''Subti''Pathways, and ''Subt''Interact in the 2012 Database issue of Nucleic Acids Research'''</big>  
+
<big>'''Now online: A description of ''Subti''Wiki, ''Subti''Pathways, and ''Subt''Interact in the [http://nar.oxfordjournals.org/content/40/D1/D1278.full.pdf+html 2012 Database issue of Nucleic Acids Research]'''</big>  
 
<pubmed> 22096228 </pubmed>
 
<pubmed> 22096228 </pubmed>
  
 
<br/>
 
<br/>
<big>'''Paper of the month: December 2011'''</big>  
+
<big>'''Paper of the month: January 2012'''</big>  
* [http://www.ncbi.nlm.nih.gov/pubmed/22056770 Bange ''et al''.] from the lab of [[Irmgard Sinning]] show how the [[YlxH]] protein activates the [[SRP]]-GTPase [[FlhF]]. The study sheds light on the evolutionary transition from RNA- to protein-driven activation in [[SRP]]-GTPases.
+
* [http://www.ncbi.nlm.nih.gov/pubmed/22209493 Segev ''et al''.] from the lab of [[Sigal Ben-Yehuda]] demonstrate that ribosomal RNAs are degraded in aging spores by [[rny|RNase Y]]. Moreover, the authors show that individual mRNAs experience degradation or accumulation in spores. The study suggests that the kinetics of spore [[germination]] depends on the conditions  that a spore had experienced before.
* '''Relevant ''Subti''Wiki pages:'''  [[Irmgard Sinning]], [[FlhF]], [[YlxH]], [[signal recognition particle]], [[motility and chemotaxis]]
+
* '''Relevant ''Subti''Wiki pages:'''  [[Sigal Ben-Yehuda]], [[rny|RNase Y]], [[germination]], [[RNases]]
<pubmed> 22056770 </pubmed>
+
<pubmed> 22209493 </pubmed>
 
* [[Previous papers of the month]]
 
* [[Previous papers of the month]]
  

Revision as of 12:00, 3 January 2012

Welcome to SubtiWiki! - Bacillus subtilis annotation the "wiki" way!

Start page small.png
Playground small.png
Wish List small.png


Contact: General Microbiology, University of Göttingen, send mail


Upcoming events:

  • April 16 - 19, 2012: The 5th European Spore Conference will take place in London, UK. contact, conference website
  • April 24 - 25, 2012: The BACELL meeting 2012 will be organized by Kevin Devine in Dublin, Ireland. contact

Past conferences


New: Subtiwiki is now on Facebook - please give it a +1!


Now online: A description of SubtiWiki, SubtiPathways, and SubtInteract in the 2012 Database issue of Nucleic Acids Research

Ulrike Mäder, Arne G Schmeisky, Lope A Flórez, Jörg Stülke
SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis.
Nucleic Acids Res: 2012, 40(Database issue);D1278-87
[PubMed:22096228] [WorldCat.org] [DOI] (I p)



Paper of the month: January 2012

Einat Segev, Yoav Smith, Sigal Ben-Yehuda
RNA dynamics in aging bacterial spores.
Cell: 2012, 148(1-2);139-49
[PubMed:22209493] [WorldCat.org] [DOI] (I p)


New procedure for account creation:

  • Due to massive spam attacks, we had to change our policy for the creation of accounts. If you want to create an account, just send me a mail. We will create the account for you as quickly as possible, then you can change your password. This does not affect existing accounts, which remain active.
  • Please remember that all members of the Bacillus community are invited to create accounts and to contribute to SubtiWiki!



News in SubtiWiki:


Genes (examples) Additional pages
spo0A SubtiPathways
glnA Lists of genes, proteins and RNAs
rny Categories
psdA Regulons
pckA methods
dnaA metabolism
rnpA protein-protein interactions
sigB genome-wide analyses
ptkA list of plasmids
mreC labs working on Bacillus
ccpA the people behind SubtiWiki
sr1 template


Publications describing SubtiWiki and SubtiPathways:

Lope A Flórez, Sebastian F Roppel, Arne G Schmeisky, Christoph R Lammers, Jörg Stülke
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki.
Database (Oxford): 2009, 2009;bap012
[PubMed:20157485] [WorldCat.org] [DOI] (I p)

Christoph R Lammers, Lope A Flórez, Arne G Schmeisky, Sebastian F Roppel, Ulrike Mäder, Leendert Hamoen, Jörg Stülke
Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis.
Microbiology (Reading): 2010, 156(Pt 3);849-859
[PubMed:19959575] [WorldCat.org] [DOI] (I p)