Difference between revisions of "AldY"

From SubtiWiki
Jump to: navigation, search
(Extended information on the protein)
(Basic information/ Evolution)
Line 65: Line 65:
 
* '''Protein family:''' aldehyde dehydrogenase family (according to Swiss-Prot)
 
* '''Protein family:''' aldehyde dehydrogenase family (according to Swiss-Prot)
  
* '''Paralogous protein(s):''' [[YfmT]], [[YcbD]], [[GabD]], [[GbsA]], [[DhaS]], [[IolA]], [[YcgN]], [[RocA]], [[AldX]], [[YwdH]]
+
* '''Paralogous protein(s):''' [[YfmT]], [[YcbD]], [[GabD]], [[GbsA]], [[DhaS]], [[IolA]], [[PutC]], [[RocA]], [[AldX]], [[YwdH]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 17:58, 17 August 2011

  • Description: aldehyde dehydrogenase (NAD), general stress protein

Gene name aldY
Synonyms yxkE
Essential no
Product aldehyde dehydrogenase (NAD)
Function stress resistance
MW, pI 52 kDa, 5.021
Gene length, protein length 1455 bp, 485 aa
Immediate neighbours yxkF, yxkD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AldY context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

general stress proteins (controlled by SigB), poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU38830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: aldehyde dehydrogenase family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3RHH (from from Bacillus halodurans C-125 complexed with NADP, 31% identity, 63% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513] [WorldCat.org] [DOI] (P p)