Difference between revisions of "YdeJ"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 48: Line 48:
  
  
 +
 +
= Categories containing this gene/protein =
 +
{{SubtiWiki category|[[membrane proteins]]}},
 +
{{SubtiWiki category|[[proteins of unknown function]]}}
 
=The protein=
 
=The protein=
  

Revision as of 21:20, 30 November 2010

  • Description: unknown

Gene name ydeJ
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 24 kDa, 4.583
Gene length, protein length 657 bp, 219 aa
Immediate neighbours ydeI, ydeK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdeJ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU05220

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

Categories containing this gene/protein

membrane proteins, proteins of unknown function

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Onuma Chumsakul, Hiroki Takahashi, Taku Oshima, Takahiro Hishimoto, Shigehiko Kanaya, Naotake Ogasawara, Shu Ishikawa
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
Nucleic Acids Res: 2011, 39(2);414-28
[PubMed:20817675] [WorldCat.org] [DOI] (I p)