Difference between revisions of "YpfB"

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(Expression and regulation)
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* '''Operon:'''  
 
* '''Operon:'''  
  
* '''[[[[[[Sigma factor]]]]]]:'''  
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* '''[[Sigma factor]]:''' [[SigF]] {{PubMed|16497325}}
  
* '''Regulation:'''  
+
* '''Regulation:''' expressed early during sporulation in the forespore ([[SigF]]) {{PubMed|16497325}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 21:10, 31 October 2009

  • Description: unknown

Gene name ypfB
Synonyms jofB
Essential no
Product unknown
Function unknown
MW, pI 6 kDa, 7.262
Gene length, protein length 174 bp, 58 aa
Immediate neighbours cmk, ypfA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YpfB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU22900

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation: expressed early during sporulation in the forespore (SigF) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325] [WorldCat.org] [DOI] (P p)