Difference between revisions of "YsdC"

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* '''Additional information:'''
 
* '''Additional information:'''
 
** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}
 
** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}
 +
** number of protein molecules per cell (minimal medium with glucose and ammonium): 44 {{PubMed|24696501}}
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:06, 17 April 2014

  • Description: similar to endo-1,4-beta-glucanase

Gene name ysdC
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ysdC
MW, pI 39 kDa, 5.55
Gene length, protein length 1083 bp, 361 aa
Immediate neighbours abnA, ysdB
Sequences Protein DNA DNA_with_flanks
Genetic context
YsdC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YsdC expression.png















Categories containing this gene/protein

utilization of specific carbon sources, most abundant proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU28820

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M42 family (according to Swiss-Prot)
  • Paralogous protein(s): YtoP

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Christine Eymann, Annette Dreisbach, Dirk Albrecht, Jörg Bernhardt, Dörte Becher, Sandy Gentner, Le Thi Tam, Knut Büttner, Gerrit Buurman, Christian Scharf, Simone Venz, Uwe Völker, Michael Hecker
A comprehensive proteome map of growing Bacillus subtilis cells.
Proteomics: 2004, 4(10);2849-76
[PubMed:15378759] [WorldCat.org] [DOI] (P p)