Difference between revisions of "YkoL"

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=References=
 
=References=
  
<pubmed>10671441,10671441, </pubmed>
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<pubmed>10671441,25666134</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 13:11, 11 February 2015

  • Description: unknown

Gene name ykoL
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ykoL
MW, pI 7 kDa, 10.026
Gene length, protein length 180 bp, 60 aa
Immediate neighbours ykzB, ykoM
Sequences Protein DNA DNA_with_flanks
Genetic context
YkoL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkoL expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

PhoP regulon, TnrA regulon

The gene

Basic information

  • Locus tag: BSU13330

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • ykzB: expressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
    • ykoL: induced by phosphate limitation (PhoP) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Letal I Salzberg, Eric Botella, Karsten Hokamp, Haike Antelmann, Sandra Maaß, Dörte Becher, David Noone, Kevin M Devine
Genome-wide analysis of phosphorylated PhoP binding to chromosomal DNA reveals several novel features of the PhoPR-mediated phosphate limitation response in Bacillus subtilis.
J Bacteriol: 2015, 197(8);1492-506
[PubMed:25666134] [WorldCat.org] [DOI] (I p)

D Robichon, M Arnaud, R Gardan, Z Pragai, M O'Reilly, G Rapoport, M Débarbouillé
Expression of a new operon from Bacillus subtilis, ykzB-ykoL, under the control of the TnrA and PhoP-phoR global regulators.
J Bacteriol: 2000, 182(5);1226-31
[PubMed:10671441] [WorldCat.org] [DOI] (P p)