Difference between revisions of "RpmGA"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:'''  [[ribosomal protein]] <br/><br/>
+
* '''Description:'''  [[ribosomal protein]] L33a <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 79: Line 79:
 
* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
+
* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
 
** phosphorylated on Arg-29 {{PubMed|22517742}}
 
** phosphorylated on Arg-29 {{PubMed|22517742}}
  
* '''Cofactor(s):'''
+
* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
Line 103: Line 103:
  
 
=== Additional information===
 
=== Additional information===
* the protein is significantly underrepresented in 45S assembly intermediates that accumulate upon depletion of [[RbgA]] {{PubMed|23700310}}
+
* the protein is significantly underrepresented in 45S assembly intermediates that accumulate upon depletion of [[RbgA]] {{PubMed|24335279,23700310}}
  
 
=Expression and regulation=
 
=Expression and regulation=
Line 138: Line 138:
  
 
=References=
 
=References=
<pubmed> 19648245 22517742 23002217 23700310</pubmed>
+
<pubmed> 19648245 22517742 23002217 24335279,23700310</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:24, 18 December 2013

Gene name rpmGA
Synonyms
Essential no PubMed
Product ribosomal protein L33a
Function translation
Gene expression levels in SubtiExpress: rpmGA
Interactions involving this protein in SubtInteract: RpmGA
MW, pI 5 kDa, 10.436
Gene length, protein length 147 bp, 49 aa
Immediate neighbours yqgN, yqgM
Sequences Protein DNA DNA_with_flanks
Genetic context
RpmGA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmGA expression.png















Categories containing this gene/protein

translation, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU24900

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:

Extended information on the protein

  • Kinetic information:
  • Modification:
    • phosphorylated on Arg-29 PubMed
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

  • the protein is significantly underrepresented in 45S assembly intermediates that accumulate upon depletion of RbgA PubMed

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References