Difference between revisions of "NdhF"

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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[respiration]]}},
 
{{SubtiWiki category|[[respiration]]}},
{{SubtiWiki category|[[membrane proteins]]}}
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{{SubtiWiki category|[[membrane proteins]]}},
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{{SubtiWiki category|[[prophage 1]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ndhF_205409_206926_1 ndhF] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ndhF_205409_206926_1 ndhF] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
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* '''[[Sigma factor]]:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 11:25, 11 September 2013

  • Description: NADH dehydrogenase (subunit 5)

Gene name ndhF
Synonyms ybxE
Essential no
Product NADH dehydrogenase (subunit 5)
Function respiration
Gene expression levels in SubtiExpress: ndhF
MW, pI 55 kDa, 10.154
Gene length, protein length 1515 bp, 505 aa
Immediate neighbours adaB, ybcC
Sequences Protein DNA DNA_with_flanks
Genetic context
NdhF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
NdhF expression.png















Categories containing this gene/protein

respiration, membrane proteins, prophage 1

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU01830

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: NADH + quinone = NAD+ + quinol (according to Swiss-Prot)
  • Protein family: complex I subunit 5 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)