Difference between revisions of "YxdJ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxdK]]'', ''[[iolJ]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxdK]]'', ''[[iolJ]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39660 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39660 DNA_with_flanks]
 
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|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yxdJ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yxdJ_context.gif]]

Revision as of 11:41, 14 May 2013

Gene name yxdJ
Synonyms
Essential no
Product two-component response regulator
Function resistance against toxic peptides
Gene expression levels in SubtiExpress: yxdJ
Interactions involving this protein in SubtInteract: YxdJ
MW, pI 26 kDa, 4.937
Gene length, protein length 687 bp, 229 aa
Immediate neighbours yxdK, iolJ
Sequences Protein DNA DNA_with_flanks
Genetic context
YxdJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxdJ expression.png
























Categories containing this gene/protein

transcription factors and their control, resistance against toxins/ antibiotics, phosphoproteins

This gene is a member of the following regulons

The YxdJ regulon:

The gene

Basic information

  • Locus tag: BSU39660

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by YxdK on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References