Difference between revisions of "Dtd"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrvJ]]'', ''[[relA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrvJ]]'', ''[[relA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14718&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27590 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27590 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27590 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yrvI_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yrvI_context.gif]]

Revision as of 13:27, 13 May 2013

Description: putative D-Tyr-tRNA(Tyr) deacylase

Gene name yrvI
Synonyms dtd
Essential no
Product putative D-Tyr-tRNA(Tyr) deacylase
Function unknown
Metabolic function and regulation of this protein in SubtiPathways:
Nucleotides (regulation)
MW, pI 14 kDa, 4.349
Gene length, protein length 396 bp, 132 aa
Immediate neighbours yrvJ, relA
Sequences Protein DNA Advanced_DNA
Genetic context
YrvI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrvI expression.png




























Categories containing this gene/protein

translation

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU27590

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: DTD family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: secreted (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References