Difference between revisions of "YdaB"
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* '''Operon:''' ''[[ydaB]]'' {{PubMed|21815947}} | * '''Operon:''' ''[[ydaB]]'' {{PubMed|21815947}} | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydaB_469426_470937_1 ydaB] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' | ||
* '''Regulation:''' | * '''Regulation:''' |
Revision as of 14:32, 12 April 2012
- Description: similar to acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)
Gene name | ydaB |
Synonyms | |
Essential | no |
Product | unknown |
Function | unknown |
MW, pI | 51 kDa, 4.849 |
Gene length, protein length | 1395 bp, 465 aa |
Immediate neighbours | mtlR, ydaC |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04170
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P96575
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. Mol Microbiol. 2011 81(6): 1459-1473. PubMed:21815947
P N Black, C C DiRusso, A K Metzger, T L Heimert
Cloning, sequencing, and expression of the fadD gene of Escherichia coli encoding acyl coenzyme A synthetase.
J Biol Chem: 1992, 267(35);25513-20
[PubMed:1460045]
[WorldCat.org]
(P p)