Difference between revisions of "YddT"

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= Categories containing this gene/protein =
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{{SubtiWiki category|[[essential genes]]}},
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{{SubtiWiki category|[[proteins of unknown function]]}}
 
=The protein=
 
=The protein=
  

Revision as of 21:19, 30 November 2010

  • Description: unknown essential gene

Gene name yddT
Synonyms
Essential yes PubMed
Product unknown
Function unknown
MW, pI 25 kDa, 9.546
Gene length, protein length 684 bp, 228 aa
Immediate neighbours yddS, ydeA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YddT context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Locus tag: BSU05100

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

Categories containing this gene/protein

essential genes, proteins of unknown function

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YomL

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Onuma Chumsakul, Hiroki Takahashi, Taku Oshima, Takahiro Hishimoto, Shigehiko Kanaya, Naotake Ogasawara, Shu Ishikawa
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
Nucleic Acids Res: 2011, 39(2);414-28
[PubMed:20817675] [WorldCat.org] [DOI] (I p)

Helena B Thomaides, Ella J Davison, Lisa Burston, Hazel Johnson, David R Brown, Alison C Hunt, Jeffery Errington, Lloyd Czaplewski
Essential bacterial functions encoded by gene pairs.
J Bacteriol: 2007, 189(2);591-602
[PubMed:17114254] [WorldCat.org] [DOI] (P p)