Difference between revisions of "SqhC"
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| − | * '''Description:''' squalene-hopene cyclase <br/><br/> | + | * '''Description:''' squalene-hopene cyclase, biosynthesis of sporulenes, protection of the spore against oxidative stress [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed]<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 12: | Line 12: | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || squalene-hopene cyclase | |style="background:#ABCDEF;" align="center"| '''Product''' || squalene-hopene cyclase | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of | + | |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of sporulenes |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 71 kDa, 7.633 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 71 kDa, 7.633 | ||
| Line 52: | Line 52: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' production of sporulenes, polycyclic terpenoid lipids [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
* '''Protein family:''' | * '''Protein family:''' | ||
| Line 72: | Line 72: | ||
* '''Interactions:''' | * '''Interactions:''' | ||
| − | * '''Localization:''' | + | * '''Localization:''' surrounds the forespores [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
=== Database entries === | === Database entries === | ||
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[sqhC]]-[[sodF]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigE]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
| − | * '''Regulation:''' | + | * '''Regulation:''' expressed during sporulation [http://www.ncbi.nlm.nih.gov/sites/entrez/18436644 PubMed] |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 18:34, 21 May 2009
- Description: squalene-hopene cyclase, biosynthesis of sporulenes, protection of the spore against oxidative stress PubMed
| Gene name | sqhC |
| Synonyms | |
| Essential | no |
| Product | squalene-hopene cyclase |
| Function | biosynthesis of sporulenes |
| MW, pI | 71 kDa, 7.633 |
| Gene length, protein length | 1896 bp, 632 aa |
| Immediate neighbours | dhaS, sodF |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: production of sporulenes, polycyclic terpenoid lipids PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: surrounds the forespores PubMed
Database entries
- Structure:
- Swiss prot entry: Q796C3
- KEGG entry: BSU19320
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed during sporulation PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
