Difference between revisions of "QdoI"

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(Undo revision 61228 by Sroppel (Talk))
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxaH]]'', ''[[yxaF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxaH]]'', ''[[yxaF]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:BSU39980&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yxaD_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/yxaD_protein.txt Protein sequence]'''
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yxaG_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yxaG_context.gif]]

Revision as of 10:54, 17 April 2009

  • Description: Fe-containing quercetin 2,3-dioxygenase

Gene name qdoI
Synonyms yxaG
Essential no
Product Fe-containing quercetin 2,3-dioxygenase
Function utilization of the abundant plant product quercetin
MW, pI 37,4 kDa, 5.562
Gene length, protein length 1011 bp, 337 aa
Immediate neighbours yxaH, yxaF
Gene sequence (+200bp) Protein sequence
Genetic context
YxaG context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:bicupin family
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): Fe(2+)
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Bowater et al. (2004) Bacillus subtilis YxaG is a novel Fe-containing quercetin 2,3-dioxygenase. FEBS Lett. 557: 45-48. PubMed