ydgK

168

similar to bicyclomycin resistance protein

Locus: BSU_05680

Molecular weight: 42.52 kDa

Isoelectric point: 10.09

Protein length: 402 aa

Gene length: 1209 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydgK

Genomic Context

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Categories containing this gene/protein

Cellular processes, Transporters, Transporters/ other, Other transporters

Lifestyles, Coping with stress, Resistance against toxins/ antibiotics/ based on similarity

Groups of genes, Membrane proteins

List of homologs in different organisms, belongs to COG2814 (Galperin et al., 2021)

Gene

Coordinates: 613,641  614,849

The protein

Protein family

major facilitator superfamily (according to UniProt)
Bcr/CmlA family (single member, according to UniProt)

Structure

2GFP (PDB) (from E. coli, 28% identity) PubMed
P96709 (AlphaFold)

Localization

cell membrane (according to UniProt)

Expression and Regulation

Operons

Genes: ydgK

Description: PubMed

Biological materials

Mutant

MGNA-C176 (ydgK::erm), available at the NBRP B. subtilis, Japan
BKE05680 (ydgK::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTTATCAAACCTTCCCT,  downstream forward: _UP4_TAAAAAAACCTGACATGACG
BKK05680 (ydgK::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTTATCAAACCTTCCCT,  downstream forward: _UP4_TAAAAAAACCTGACATGACG

References

Research papers

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