Difference between revisions of "YycH"
| Line 24: | Line 24: | ||
| |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yycI]]'', ''[[walK]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yycI]]'', ''[[walK]]'' | ||
| |- | |- | ||
| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40390 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40390 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40390  | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40390 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40390 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40390 DNA_with_flanks] | 
| |- | |- | ||
| |colspan="2" | '''Genetic context''' <br/> [[Image:yycH_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yycH_context.gif]] | ||
Revision as of 11:44, 14 May 2013
-  Description: negative effector of WalK, controls cell wall metabolism 
| Gene name | yycH | 
| Synonyms | |
| Essential | no | 
| Product | negative effector of WalK | 
| Function | control of cell wall metabolism | 
| Gene expression levels in SubtiExpress: yycH | |
| Interactions involving this protein in SubtInteract: YycH | |
| MW, pI | 52 kDa, 5.589 | 
| Gene length, protein length | 1365 bp, 455 aa | 
| Immediate neighbours | yycI, walK | 
| Sequences | Protein DNA DNA_with_flanks | 
| Genetic context    This image was kindly provided by SubtiList | |
| Expression at a glance   PubMed   | |
Contents
Categories containing this gene/protein
cell wall/ other, transcription factors and their control, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU40390
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot), spotty close to the membrane PubMed
Database entries
- Structure: 2FGT
- UniProt: Q794W0
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation: expressed during vegetative growth, repressed during stationary phase PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Tatsuya Fukushima, Isako Furihata, Robyn Emmins, Richard A Daniel, James A Hoch, Hendrik Szurmant  
A role for the essential YycG sensor histidine kinase in sensing cell division. 
Mol Microbiol: 2011, 79(2);503-22 
[PubMed:21219466]
  [WorldCat.org]
 [DOI]
 (I p)
Hendrik Szurmant, Lintao Bu, Charles L Brooks, James A Hoch  
An essential sensor histidine kinase controlled by transmembrane helix interactions with its auxiliary proteins. 
Proc Natl Acad Sci U S A: 2008, 105(15);5891-6 
[PubMed:18408157]
  [WorldCat.org]
 [DOI]
 (I p)
Patrick D McLaughlin, Benjamin G Bobay, Erin J Regel, Richele J Thompson, James A Hoch, John Cavanagh  
Predominantly buried residues in the response regulator Spo0F influence specific sensor kinase recognition. 
FEBS Lett: 2007, 581(7);1425-9 
[PubMed:17350627]
  [WorldCat.org]
 [DOI]
 (P p)
Hendrik Szurmant, Michael A Mohan, P Michael Imus, James A Hoch  
YycH and YycI interact to regulate the essential YycFG two-component system in Bacillus subtilis. 
J Bacteriol: 2007, 189(8);3280-9 
[PubMed:17307850]
  [WorldCat.org]
 [DOI]
 (P p)
Hendrik Szurmant, Haiyan Zhao, Michael A Mohan, James A Hoch, Kottayil I Varughese  
The crystal structure of YycH involved in the regulation of the essential YycFG two-component system in Bacillus subtilis reveals a novel tertiary structure. 
Protein Sci: 2006, 15(4);929-34 
[PubMed:16600972]
  [WorldCat.org]
 [DOI]
 (P p)
Hendrik Szurmant, Kristine Nelson, Eun-Ja Kim, Marta Perego, James A Hoch  
YycH regulates the activity of the essential YycFG two-component system in Bacillus subtilis. 
J Bacteriol: 2005, 187(15);5419-26 
[PubMed:16030236]
  [WorldCat.org]
 [DOI]
 (P p)
C Fabret, J A Hoch  
A two-component signal transduction system essential for growth of Bacillus subtilis: implications for anti-infective therapy. 
J Bacteriol: 1998, 180(23);6375-83 
[PubMed:9829949]
  [WorldCat.org]
 [DOI]
 (P p)

