Difference between revisions of "YnbA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU17430 ynbA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU17430 ynbA]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 9.245   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 9.245   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoVK]]'', ''[[ynbB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoVK]]'', ''[[ynbB]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13627&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17430 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17430 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17430 Advanced_DNA]
 
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Revision as of 12:54, 13 May 2013

  • Description: GTP-binding protein

Gene name ynbA
Synonyms
Essential no
Product GTP-binding protein
Function unknown
Gene expression levels in SubtiExpress: ynbA
MW, pI 37 kDa, 9.245
Gene length, protein length 1002 bp, 334 aa
Immediate neighbours spoVK, ynbB
Sequences Protein DNA Advanced_DNA
Genetic context
YnbA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YnbA expression.png















Categories containing this gene/protein

GTP-binding proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU17430

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Binds and hydrolyzes GTP and readily exchanges GDP for GTP
  • Protein family: GTP1/OBG family (according to Swiss-Prot) Era/Obg family

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Naotake Ogasawara, Nara, Japan

Your additional remarks

References

Reviews

Original publications

Takuya Morimoto, Pek Chin Loh, Tomohiro Hirai, Kei Asai, Kazuo Kobayashi, Shigeki Moriya, Naotake Ogasawara
Six GTP-binding proteins of the Era/Obg family are essential for cell growth in Bacillus subtilis.
Microbiology (Reading): 2002, 148(Pt 11);3539-3552
[PubMed:12427945] [WorldCat.org] [DOI] (P p)