Difference between revisions of "YvbW"

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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' amino acid-polyamine-organocation transporter family
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* '''Protein family:''' secondary amino acid transporter
  
* '''Paralogous protein(s):'''
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* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YtnA]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''  
  
* '''Localization:'''
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* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 09:20, 13 November 2012

  • Description: putative leucine permease

Gene name yvbW
Synonyms
Essential no
Product putative leucine permease
Function unknown
Gene expression levels in SubtiExpress: yvbW
MW, pI 49 kDa, 9.837
Gene length, protein length 1341 bp, 447 aa
Immediate neighbours yvbV, yvbX
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvbW context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YvbW expression.png















Categories containing this gene/protein

transporters/ other, putative amino acid transporter, membrane proteins

This gene is a member of the following regulons

T-box

The gene

Basic information

  • Locus tag: BSU34010

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: secondary amino acid transporter

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Michiel Wels, Tom Groot Kormelink, Michiel Kleerebezem, Roland J Siezen, Christof Francke
An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters.
BMC Genomics: 2008, 9;330
[PubMed:18625071] [WorldCat.org] [DOI] (I e)