YjcG

• Description: putative 2'-5' RNA-ligase
  
  

Gene name	yjcG
Synonyms
Essential	no
Product	putative 2'-5' RNA-ligase
Function	RNA metabolism
Gene expression levels in SubtiExpress: yjcG
MW, pI	19 kDa, 5.572
Gene length, protein length	513 bp, 171 aa
Immediate neighbours	yjcF, yjcH
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

poorly characterized/ putative enzymes

The gene

Basic information

• Locus tag: BSU11850

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: UPF0477 family (according to Swiss-Prot)

• Paralogous protein(s): YtlP

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure: 2D4G

• UniProt: O31629

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: yjcG PubMed

• Sigma factor:

• Regulation: repressed by casamino acids PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Dan Li, Cong Liu, Yu-He Liang, Lan-Fen Li, Xiao-Dong Su
Crystal structure of B. subtilis YjcG characterizing the YjcG-like group of 2H phosphoesterase superfamily.
Proteins: 2008, 72(3);1071-6
[PubMed:18473364] [WorldCat.org] [DOI] (I p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)